I know Stardock is removing the research cost multiplier which is affecting end games, but that this feature was actually put in at the request of some of the beta testers who felt the late-game tech race wasn't epic enough.
Would it be possible to have another category of Research Speed in the game setup window? We now have Immense Galaxies: how about Glacial Research Speed?
Alternately, someone could just come up with a quick & dirty mod to modify the research costs, making technologies further along the tree increase at an accelerating rate, or some such.