Keep the save, though.
Yea I held onto it to see if there's anything that could save it, but haven't messed anymore with. Kinda pissed me off at the time, as I had'em just where I wanted them
see if you can get Xeno Ethics off of someone and go Neutral.
No go there it's still too early in the game, all the good tech they have is ones I traded them
Probably not fret about it too much, just start another. Weird that in Hundreds(and possibly 1000) hours playing this game I don't remember coming across that glitch before.