I know that lots of people hated auto-select but I'm one of the few that actually liked it so I'm sad to see that it's unavailable as an option. I find it annoying having to hit tab every time a ship has finished movement.
I've also noticed that planets with PQ<10 (both colonised and uncolonised) still sometimes change terrain after reloading the game for the first time. It's no fun having planets where over half of the tiles are in the ocean. I thought that this bug had been fixed in the beta?
Sentry doesn't do anything anymore or at least it isn't noticable with auto-select gone.
Minor races don't develop their planets anymore. I've invaded 3 minor races between the end of the 2nd year and beggining of the 4th year. The first two had only built five buildings and none of them were factories. The third that I invaded in Jan 4th year, was a little better. It still had only five buildings but three of them were at least factories.
I can still see the stats of an AI, turn 1 in Foreign Policy, even though I haven't met any AIs. It seems that you only removed the picture so that you can't see who it is.
Turn button doesn't turn green at end of turn.