Recently, I came across a couple minor glitches. V 1.0X. I don't know if they existed before this version, but I've found them now.
First, while I was creating a custom race, I somehow ended up with two simultaneous color schemes. So every new game, I have certain inconsistencies between my starmap colors, and ship portrait colors. Upon restarting this inconsistency went away. I'll look into reproducing it. I suspect it had something to do with going back and forward in the setup screens. I believe it affected only the core designs, not any new ones I might make.
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The second glitch relates to the trade screen. It focuses on the displayed max trade value for a route. As far as I can see over the course of months, the max value always matched the current value. I believe the intended purpose was to record the highest income recieved in a turn from a route, or the expected highest, but it never deviated from the current value.