1. When you end your turn, it would be nice if all the ships that have autopilot would move at the same time. Of course, you would have to move some ships individually, like ones attacking other races you aren't at war with and constructors.
2. For custructors, it would be nice to basically have markers on the map in whatever order you want. Then constructors would auto launch themselves and go to the next marker in queue. We would also need the ability to queue up the same spot more than once because we will want to upgrade the starbase first. If the space is empty, you would just have to pop up the starbase creation screen.
3. Give the ability to turn off auto-focus when a ship goes onto a Rally Point.